|
|
Line 30: |
Line 30: |
| ==Log== | | ==Log== |
| | | |
− | ===2007===
| + | [[Dan's Old Logs]] |
− | ====October 2007====
| |
− | '''Wednesday 24'''
| |
− | <pre>
| |
− | Started working 3PM, had Freshman Physics in the middle. Left at 6:30PM.
| |
− | Experienced crash hitting Uranium target. Start trying other materials. Barium crashes too. Is Barium's
| |
− | (for example) small definition a problem?
| |
− | Barium crash generates "Unknown Hit Type on SVT1" (for each SVT) error message.
| |
− | Frustrating that GEANT4 is seemingly so specialized that google returns few people talking about it.
| |
− | Read on GEANT4 site that ALL particles must be specified (seems reasonable). Possibly the
| |
− | interactions are generating undefined particles? Should search code for error message tomorrow.
| |
− | Reorganized/expanded my bits of the wiki.
| |
− | Added GUI elements to Batch Guide.
| |
− | </pre>
| |
− | | |
− | '''Thursday 25'''
| |
− | <pre>
| |
− | Started working 12:45. Left 13:45 for Linguistics, back at 16:00.
| |
− | Searched for Magnetic Field definition. Looks like we need to make it.
| |
− | Searched for error message having to do with Unknown Hits. Didn't find it. Could have to do with using the
| |
− | default "geantino" particle?
| |
− | Looked around code for place to add handy things to menus (such as particle type) and found a reference to
| |
− | visTutor/gui.mac. It has exactly the sorts of things I would add! Why is it not getting read? Maybe should
| |
− | set-up breakpoints in Sim12.cc?
| |
− | You can apparently run macros from within the GUI, which I tried. At first I thought it didn't work, but it did.
| |
− | The first few lines of the macros I tried set the verbosity to 0, so I didn't see them running commands. Further,
| |
− | the addMenu etc. commands seem not to work. Why? Probably something to do with pointers...
| |
− | Not speaking of which, why does the source of Sim12 say that Batch Mode is the default, when it clearly is not?
| |
− | Also, there's something funky with that whole area of command line parsing.
| |
− | GUI mode should have ability to run commands. Batch mode should be able to run headless, dump data. Forget the
| |
− | pictures.
| |
− | Need to figure-out what the mode-selection code is actually doing.
| |
− | </pre>
| |
− | | |
− | '''Friday 26'''
| |
− | <pre>
| |
− | Worked from 10:00-11:00, and 15:00-18:00
| |
− | Trying to understand mode code. Think I've got pointers now, but I need to try using them.
| |
− | Thought of a way to turn on/off magnetic fields, change materials, etc. on the fly: Can change in-memory copy of
| |
− | XML file, then re-load that new copy. With this we could add buttons to toggle fields, change target materials,
| |
− | etc. On second thought, maybe we don't care about being able to do this.
| |
− | Meeting with Maurik. Sounds like priority is getting real data out of the program on particle trajectories etc.
| |
− | Tonight should polish build guide and run through the GEANT4 Application Developer's Guide in order to understand
| |
− | Sim12.
| |
− | </pre>
| |
− | | |
− | '''Saturday and Sunday, 26-27'''
| |
− | <pre>
| |
− | Off the clock.
| |
− | Re-made build guide, building on MacOS X on Alice for hints. Should mention that I needed to install expat,
| |
− | motif, svn. Also, EVIO Makfile hack.
| |
− | Realized that GUI mode has a command line!!! It was there all the time, but we thought it was a meaningless
| |
− | box!
| |
− | </pre>
| |
− | | |
− | '''Tuesday, 30'''
| |
− | <pre>
| |
− | Started working through GEANT4 Application Developer's Guide:
| |
− | http://geant4.web.cern.ch/geant4/G4UsersDocuments/UsersGuides/ForApplicationDeveloper/html/Examples/NoviceCodes.html
| |
− | </pre>
| |
− | | |
− | ====November 2007====
| |
− | '''Friday, 02'''
| |
− | <pre>
| |
− | Worked with Sam, deciphering output code.
| |
− | </pre>
| |
− | | |
− | '''Monday, 05'''
| |
− | <pre>
| |
− | In at 10:30, out at 12:00.
| |
− | Working on getting Sim12 to log to a file.
| |
− | | |
− | </pre>
| |
− | | |
− | '''Thursday, 15'''
| |
− | <pre>
| |
− | Trying to get GEMC to compile.
| |
− | First compiled QT4, installed into ~/QT4
| |
− | Installed SCons into ~/CLAS12/SCons
| |
− | Copied GEMC (from Maurik's dir on Taro) to ~/CLAS12/GEMC
| |
− | Tried to compile GEMC, which failed.
| |
− | After many successive failures, found the following things:
| |
− | Need to get qt4.py from http://www.iua.upf.es/~dgarcia/Codders/sconstools.html
| |
− | and copy it to $SCONS_ROOT_DIR/lib/scons-$SCONS_version/SCons/Tool/
| |
− | Need to add pyscripts dir (from SVN/Maurik's dir) to PYTHONPATH, a la:
| |
− | export PYTHONPATH="/net/home/dan/CLAS12/pyscripts"
| |
− | Need to add SCons bin dir to PATH, a la:
| |
− | PATH="$PATH:/net/home/dan/CLAS12/SCons/bin"
| |
− | Need to add directory installed QT to to environment, a la:
| |
− | export QTDIR="/net/home/dan/QT4"
| |
− | And add PKG_CONFIG_PATH="/net/home/dan/QT4/lib/pkgconfig" to environment
| |
− | Current error message:
| |
− | [dan@benfranklin GEMC]$ scons | |
− | scons: Reading SConscript files ...
| |
− | Loading qt4 tool...
| |
− | KeyError: 'MYSQL':
| |
− | File "/net/home/dan/CLAS12/GEMC/SConstruct", line 27:
| |
− | loadmysql(env)
| |
− | File "/net/home/dan/CLAS12/pyscripts/loadmysql.py", line 9:
| |
− | MYSQL = OSENV['MYSQL']
| |
− | File "/usr/lib/python2.3/UserDict.py", line 19:
| |
− | def __getitem__(self, key): return self.data[key]
| |
− | | |
− | So re-compiled QT4 with -qt-sql-mysql configure option.
| |
− | | |
− | </pre>
| |
− | | |
− | '''Friday, 16'''
| |
− | <pre>
| |
− | Got past previous error with new QT4, but now get:
| |
− | | |
− | [dan@benfranklin GEMC]$ scons
| |
− | scons: Reading SConscript files ...
| |
− | Loading qt4 tool...
| |
− | NameError: global name 'fullpath1' is not defined:
| |
− | File "/net/home/dan/CLAS12/GEMC/SConstruct", line 14:
| |
− | env = Environment(tools=['default','qt4'], options = opts)
| |
− | File "/net/home/dan/CLAS12/SCons/lib/scons-0.97.0d20070918/SCons/Environment.py", line 874:
| |
− | apply_tools(self, tools, toolpath)
| |
− | File "/net/home/dan/CLAS12/SCons/lib/scons-0.97.0d20070918/SCons/Environment.py", line 101:
| |
− | env.Tool(tool)
| |
− | File "/net/home/dan/CLAS12/SCons/lib/scons-0.97.0d20070918/SCons/Environment.py", line 1491:
| |
− | tool(self)
| |
− | File "/net/home/dan/CLAS12/SCons/lib/scons-0.97.0d20070918/SCons/Tool/__init__.py", line 175:
| |
− | apply(self.generate, ( env, ) + args, kw)
| |
− | File "/net/home/dan/CLAS12/SCons/lib/scons-0.97.0d20070918/SCons/Tool/qt4.py", line 218:
| |
− | QT4_MOC = locateQt4Command(env,'moc', env['QTDIR']),
| |
− | File "/net/home/dan/CLAS12/SCons/lib/scons-0.97.0d20070918/SCons/Tool/qt4.py", line 201:
| |
− | raise "Qt4 command '" + command + "' not found. Tried: " + fullpath1 + " and "+ fullpath2
| |
− | | |
− | Found that I accidentally installed into a funky directory. Blah.
| |
− | Fixed, then ran into another error message. Realized I had to export MYSQL="/"
| |
− | Ridiculous.
| |
− | | |
− | Also, need to add MYSQL lib dir to LD_PATH
| |
− | | |
− | It works!
| |
− | | |
− | </pre>
| |
− | | |
− | '''Wednesday, 21'''
| |
− | <pre>
| |
− | GEMC thoughts:
| |
− | Not all the buttons work
| |
− | Text output works with ./gemc -OUTPUT="txt,blahlog"
| |
− | Need command line
| |
− | Is there a batch mode?
| |
− | Over vacation, read through all of it, work through C++ tutorials, and GEANT4 developer's guide.
| |
− | Make Glossary! (CLARA, GEMC, SIM12,
| |
− | </pre>
| |
− | | |
− | '''Monday, 26'''
| |
− | <pre>
| |
− | In at 10:15, out at 11:15
| |
− | In at 12:00, out at 13:00
| |
− | In at 15:30, out at
| |
− | Got new gemc code from Maurik
| |
− | Need to
| |
− | export EVIO=$EVIOROOT
| |
− | Also, typo in current version of pyscripts/loadevio.py.
| |
− | Change to point to something sane for include dir.
| |
− | Had to further mutilate the lib section to get it to compile.
| |
− | Working on adding command line to GUI
| |
− | Added text box (to old version)by adding
| |
− | | |
− | #include <QLineEdit>
| |
− | QLineEdit *commandLineEdit = new QLineEdit();
| |
− | viewLayout->addWidget(commandLineEdit);
| |
− | | |
− | to gui/src/gemc_MainGui.cc.
| |
− | | |
− | Still haven't gotten it to compile.
| |
− | | |
− | </pre>
| |
− | | |
− | '''Monday, 26'''
| |
− | <pre>
| |
− | Trying to add a command line box. QT Learning curve indeed!
| |
− | Learning about Slots and Signals.
| |
− | Didn't try to get new gemc to compile today, though Maurik got us the latest pyscripts.
| |
− | How can I pass an arbitrary
| |
− | </pre>
| |
− | | |
− | '''Friday, 26'''
| |
− | <pre>
| |
− | MUAHAHAHAHAHAHAHAAAA! Finally got the command box working. Also, new gemc compiles.
| |
− | Code is ugly, though. I want to clean it up before letting others see it. Also, must
| |
− | document how to get gemc to compile (difficulty is evio, I had to hack loadevio.py).
| |
− | Email Maurizio and Maurik tonight.
| |
− | The thing holding-up my command box was that I was having difficulty converting the
| |
− | QString I got back from the QLineEdit box into a string I could print/etc. It seems
| |
− | like it should have been so simple...
| |
− | </pre>
| |
− | | |
− | ====December 2007====
| |
− | '''Monday, 10'''
| |
− | <pre>
| |
− | Worked on adding command history, fixed a segfault, made layout flow
| |
− | </pre>
| |
− | | |
− | '''Tuesday, 11'''
| |
− | <pre>
| |
− | 12:15-13:15
| |
− | Polished command history, started synching with upstream.
| |
− | </pre>
| |
− | | |
− | ===2008===
| |
− | ====January 2008====
| |
− | '''Tuesday, 15'''
| |
− | <pre>
| |
− | 13:15-17:15
| |
− | Making new CLAS12 suite in /net/data/pumpkin2/taro/CLAS12
| |
− | For EL5-x64, added -b 64 option during XERCESC build. Should we add -s?
| |
− | </pre>
| |
− | | |
− | '''Wednesday, 16'''
| |
− | <pre>
| |
− | 14:00-16:45
| |
− | Worked on building CLAS12 suite. Intending to build on Pumpkin for RHEL5-x64,
| |
− | Parity/Ben Franklin for RHEL4-x32, and Corn for RHEL5-x32.
| |
− | Think that Maurik is pulling the production tree of gemc, while we probably want the
| |
− | development version. Even so, new production gemc fails to build against old GEANT4.
| |
− | Corn keeps going down.
| |
− | | |
− | </pre>
| |
− | | |
− | '''Thursday, 17'''
| |
− | <pre>
| |
− | 12:45-14:30, 17:00-17:30
| |
− | Building things on Corn.
| |
− | ./configure -qt-sql-mysql --prefix=/net/data/pumpkin2/taro/CLAS12/RHEL5_x32/QT
| |
− | Network storage went down.
| |
− | </pre>
| |
− | | |
− | '''Tuesday, 22'''
| |
− | <pre>
| |
− | 13:30-16:30
| |
− | ./runConfigure -p linux -c gcc -x g++ -b 64 -s
| |
− | Building QT on Taro with instructions from wiki, got errors
| |
− | | |
− | g++ -c -include .pch/release-shared/QtGui -m64 -pipe -g -fno-exceptions -pthread -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -O2 -Wall -W -D_REENTRANT -fPIC -DQT_SHARED -DQT_BUILD_GUI_LIB -DQT_NO_CAST_TO_ASCII -DQT_ASCII_CAST_WARNINGS -DQT_44_API_QSQLQUERY_FINISH -DQT_MOC_COMPAT -DQT_RASTER_IMAGEENGINE -DQT_HAVE_MMX -DQT_HAVE_SSE -DQT_HAVE_MMXEXT -DQT_HAVE_SSE2 -DQT_NO_STYLE_MAC -DQT_NO_STYLE_WINDOWSVISTA -DQT_NO_STYLE_WINDOWSXP -DQ_INTERNAL_QAPP_SRC -DQT_NO_DEBUG -DQT_CORE_LIB -D_LARGEFILE64_SOURCE -D_LARGEFILE_SOURCE -I../../mkspecs/linux-g++-64 -I. -I../../include/QtCore -I../../include/QtCore -I../../include -I../../include/QtGui -I/usr/include/freetype2 -I../3rdparty/harfbuzz/src -Idialogs -I.moc/release-shared -I/usr/X11R6/include -I.uic/release-shared -o .obj/release-shared/qstylesheetstyle.o styles/qstylesheetstyle.cpp
| |
− | ^C../../include/QtCore/../../src/corelib/arch/qatomic_x86_64.h: In member function `virtual QRect QStyleSheetStyle::subControlRect(QStyle::ComplexControl, const QStyleOptionComplex*, QStyle::SubControl, const QWidget*) const':
| |
− | ../../include/QtCore/../../src/corelib/arch/qatomic_x86_64.h:118: error: inconsistent operand constraints in an `asm'
| |
− | ../../include/QtCore/../../src/corelib/arch/qatomic_x86_64.h:118: error: inconsistent operand constraints in an `asm'
| |
− | ../../include/QtCore/../../src/corelib/arch/qatomic_x86_64.h:118: error: inconsistent operand constraints in an `asm'
| |
− | ../../include/QtCore/../../src/corelib/arch/qatomic_x86_64.h:118: error: inconsistent operand constraints in an `asm'
| |
− | make[1]: *** Deleting file `.obj/release-shared/qstylesheetstyle.o'
| |
− | make[1]: *** [.obj/release-shared/qstylesheetstyle.o] Interrupt
| |
− | make: *** [sub-gui-make_default-ordered] Interrupt
| |
− | | |
− | Incidentally, used the following command to configure, with CLAS12ROOT set:
| |
− | ./configure -qt-gif -no-cups -no-qt3support -prefix $CLAS12ROOT/QT -qt-sql-mysql -no-exceptions
| |
− | </pre>
| |
− | | |
− | '''Friday, 25'''
| |
− | <pre>
| |
− | 09:30-10:00
| |
− | Googling QT build message yielded someone claiming it was due to a broken compiler. As the change will at worse
| |
− | result in slightly poorer performance, I take the suggestion at http://lists.trolltech.com/qt-interest/2007-05/thread01156-0.html
| |
− | and remove the -02 optimization flag from mkspecs/common/g++.conf
| |
− | Trying on Corn (which Maurik says should be stable now) and Taro.
| |
− | *sigh* Corn crashed right after I untarred QT.
| |
− | | |
− | ~15:30
| |
− | Taro finished building though!
| |
− | Now try again on Corn.
| |
− | Bah, Corn needs mysql!
| |
− | </pre>
| |
− | | |
− | '''Monday, 28'''
| |
− | 09:15-09:45
| |
− | <pre>
| |
− | Started compile of GEANT4 9.1, using configure script.
| |
− | </pre>
| |
− | | |
− | ====February 2008====
| |
− | '''Saturday, 02'''
| |
− | <pre>
| |
− | 00:15-01:30, 16:45-19:05
| |
− | | |
− | Well, I'm sick of this.
| |
− | SSH in to Parity.
| |
− | Start new tree under /net/data/pumpkin2/CLAS12
| |
− | Untar CLHEP to Build and run
| |
− | export CLAS12ROOT=/net/data/pumpkin2/CLAS12/RHEL4_x32
| |
− | ./configure --prefix=/net/data/pumpkin2/CLAS12/RHEL4_x32/CLHEP --disable-shared
| |
− | make
| |
− | make check
| |
− | make install
| |
− | export CLHEP_BASE_DIR=/net/data/pumpkin2/CLAS12/RHEL4_x32/CLHEP
| |
− | | |
− | Now untar XERXESC to Build and run
| |
− | ./runConfigure -plinux -cgcc -xg++ -s
| |
− | make
| |
− | Build fails. It seems it's got a really silly build process.
| |
− | Move the top xercesc source dir to the intended destination, and build again. i.e.:
| |
− | ./runConfigure -plinux -cgcc -xg++ -s
| |
− | make
| |
− | | |
− | Now untar QT to Build and run
| |
− | ./configure -qt-gif -no-cups -no-qt3support -prefix $CLAS12ROOT/QT -qt-sql-mysql -no-exceptions -static
| |
− | gmake
| |
− | | |
− | in qt build dir,
| |
− | gmake install
| |
− | export QTDIR=$CLAS12ROOT/QT
| |
− | export QTLIB=/net/data/pumpkin2/CLAS12/RHEL4_x32/QT/lib
| |
− | export PKG_CONFIG_PATH=/net/data/pumpkin2/CLAS12/RHEL4_x32/QT/lib/pkgconfig
| |
− | export LD_LIBRARY_PATH=$QTDIR/lib:$LD_LIBRARY_PATH
| |
− | export PATH=$QTDIR:$PATH
| |
− | | |
− | Untar Geant4 into /net/data/pumpkin2/CLAS12/RHEL4_x32/GEANT4_9.1
| |
− | Unpack data, etc.
| |
− | ./Configure -build
| |
− | And it's off!
| |
− | | |
− | 18:45-
| |
− | It finished building GEANT4.
| |
− | | |
− | mkdir ~/mysql
| |
− | ln -s /usr/include/mysql ~/mysql/include
| |
− | ln -s /usr/lib/mysql ~/mysql/lib
| |
− | export MYSQL=~/mysql
| |
− | | |
− | Copy pyscripts, gemc, scons
| |
− | export PYTHONPATH=/net/data/pumpkin2/CLAS12/pyscripts
| |
− | export PATH=$PATH:/net/data/pumpkin2/CLAS12/SCons/bin
| |
− | export G4INSTALL=/net/data/pumpkin2/CLAS12/RHEL4_x32/GEANT4_9.1
| |
− | export EVIO=/net/data/pumpkin2/taro/CLAS12/RHEL4_x32/EVIO
| |
− | scons
| |
− | Get this:
| |
− | | |
− | [dan@parity GEMC_DEVEL]$ scons
| |
− | scons: Reading SConscript files ...
| |
− | scons: done reading SConscript files.
| |
− | scons: Building targets ...
| |
− | Making gemc.o...
| |
− | gemc.cc: In function `int main(int, char**)':
| |
− | gemc.cc:176: error: `G4UIQt' has not been declared
| |
− | scons: *** [gemc.o] Error 1
| |
− | scons: building terminated because of errors.
| |
− | | |
− | *sigh*
| |
− | </pre>
| |
− | | |
− | '''Sunday, 03'''
| |
− | <pre>
| |
− | 00:30-01:45
| |
− | Continue working on RHEL4_x32. No success.
| |
− | </pre>
| |
− | | |
− | '''Tuesday, 05'''
| |
− | <pre>
| |
− | 09:30-10:30, 12:30-14:00
| |
− | Worked with Kyle to get ANYTHING to work (in particular RHEL4_x32) and
| |
− | largely failed. Eventually decided we need to start over. This time
| |
− | with more documentation instead of waiting until things work (because they
| |
− | usually don't).
| |
− | </pre>
| |
− | | |
− | '''Thursday, 14'''
| |
− | <pre>
| |
− | 12:00-13:45
| |
− | Starting over, me on RH4 (x32 on parity, x64 on Taro), Kyle on RH5.
| |
− | Compiled up through QT on RHEL4_x32. QT building on RHEL4_x64.
| |
− | </pre>
| |
− | | |
− | '''Friday, 15'''
| |
− | <pre>
| |
− | 08:45-09:30
| |
− | QT build failed on x64. Remembered I need to remove -02 from the optimization flags
| |
− | in mkspecs/common/g++.conf in the QT source directory. Off again, with Geant building on Parity
| |
− | (set env vars, then gmake in G4/source).
| |
− | </pre>
| |
− | | |
− | '''Monday, 18'''
| |
− | <pre>
| |
− | 09:00-10:00, 15:15-16:45
| |
− | To build EVIO:
| |
− | untar the evio-2.0.tar.gz version
| |
− | move it to destination directory (say, something/EVIO)
| |
− | cd into EVIO
| |
− | for 32bit build, run INSTALL_DIR=something/EVIO make install
| |
− | for 64bit build, run INSTALL_DIR=something/EVIO CODA_USE64BITS make install
| |
− | | |
− | Finished RHEL4_x32. Segfaults:
| |
− | | |
− | </pre>
| |
− | | |
− | '''Tuesday,19'''
| |
− | <pre>
| |
− | 09:00-10:00
| |
− | Current hang-up with Taro (RHEL4_x64):
| |
− | | |
− | [dan@taro GEMC-RHEL4_x64]$ scons --debug=findlibs --debug=includes
| |
− | scons: Reading SConscript files ...
| |
− | | |
− | scons: *** No tool named 'qt4': not a Zip file
| |
− | File "/net/home/dan/GEMC-RHEL4_x64/SConstruct", line 14, in ?
| |
− | | |
− | We've had this before, but it sounds like it is an all-purpose error message,
| |
− | with no useful info. Trying to track down what is wrong.
| |
− | </pre>
| |
− | | |
− | Remember to set umask!
| |
− | | |
− | | |
− | My current environment script (run each new session, suitable for build
| |
− | environment):
| |
− | | |
− | <pre>
| |
− | #Change the mention of RHEL4_x64 and Linux_x64-x64 for other platforms.
| |
− | | |
− | export PLATFORM=RHEL4_x64
| |
− | export GEMC=~/GEMC-$PLATFORM
| |
− | export CLAS12ROOT=/net/data/pumpkin2/CLAS12
| |
− | | |
− | export G4SYSTEM=Linux-g++
| |
− | export G4WORKDIR=$CLAS12ROOT/$PLATFORM/GEANT4.9.1
| |
− | export G4ROOT=$CLAS12ROOT/$PLATFORM/GEANT4.9.1
| |
− | export G4INSTALL=$G4ROOT
| |
− | export G4LIB=$G4INSTALL/lib
| |
− | export G4VERSION=geant4.9.1
| |
− | export OGLHOME=/usr/X11R6
| |
− | | |
− | export CLHEP_BASE_DIR=$CLAS12ROOT/$PLATFORM/CLHEP
| |
− | export XERCESCROOT=$CLAS12ROOT/$PLATFORM/XERCESC
| |
− | export EVIO="$CLAS12ROOT/$PLATFORM/EVIO"
| |
− | export EVIOROOT="$EVIO"
| |
− | | |
− | export QTDIR=$CLAS12ROOT/$PLATFORM/QT
| |
− | export QTHOME=$QTDIR
| |
− | export QTLIB=$QTDIR/lib
| |
− | | |
− | export G4UI_BUILD_QT_SESSION=1
| |
− | export G4UI_USE_QT=1
| |
− | | |
− | export G4VIS_BUILD_OPENGLQT_DRIVER=1
| |
− | export G4VIS_USE_OPENGLQT=1
| |
− | | |
− | export G4VIS_BUILD_OPENGLX_DRIVER=1
| |
− | export G4VIS_USE_OPENGLX=1
| |
− | | |
− | export G4VIS_BUILD_DAWN_DRIVER=0
| |
− | export G4VIS_USE_DAWN=0
| |
− | | |
− | export G4UI_BUILD_OI_SESSION=0
| |
− | export G4UI_USE_OI=0
| |
− | | |
− | export G4UI_BUILD_OIX_SESSION=0
| |
− | export G4UI_USE_OIX=0
| |
− |
| |
− | export G4UI_BUILD_RAYTRACERX_SESSION=1
| |
− | export G4UI_USE_RAYTRACERX=1
| |
− | | |
− | export G4LISTS_BASE=$G4ROOT/physics_lists
| |
− | | |
− | export NeutronHPCrossSections=$G4ROOT/data/G4NDL # Data for neutron scattering processes
| |
− | export G4LEVELGAMMADATA=$G4ROOT/data/PhotonEvaporation # Nuclear Photon evaporation data
| |
− | export G4RADIOACTIVEDATA=$G4ROOT/data/RadioactiveDecay # Data for radioactive decay hadronic processes under data
| |
− | export G4LEDATA=$G4ROOT/data/G4EMLOW # Data for low energy electromagnetic processes
| |
− | #export G4ELASTICDATA=$G4ROOT/data/Elastic # Data for elastic scattering processes
| |
− | | |
− | export PATH=$PATH:$G4INSTALL/bin/$G4SYSTEM:$GEMC:$GEMC/database_io:$QTDIR/bin
| |
− | export SCONS_LIB_DIR="$CLAS12ROOT/SCons/lib"
| |
− | export PKG_CONFIG_PATH="$QTLIB/pkgconfig"
| |
− | export PYTHONPATH="$CLAS12ROOT/pyscripts"
| |
− | export PATH="$PATH:$CLAS12ROOT/SCons/bin:$QTDIR/bin"
| |
− | export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:$EVIO/Linux-x86_64-64/lib:$QTLIB:$G4INSTALL/lib/$G4SYSTEM:/$CLHEP_BASE_DIR/lib"
| |
− | export MYSQL="/"
| |
− | export BMS_HOME="$CLAS12ROOT/BMS"
| |
− | </pre>
| |
− | | |
− | '''Friday,22'''
| |
− | <pre>
| |
− | 09:00-10:00
| |
− | 11:00-12:30
| |
− | | |
− | Trying to find source of segfault on RHEL4_x32 by using GDB. Need to re-compile GEANT4 with debugging symbols.
| |
− | Prettied the wiki a bit. Needs overhaul.
| |
− | </pre>
| |
− | | |
− | '''Monday,25'''
| |
− | <pre>
| |
− | 16:00-17:45
| |
− | Recompiled RHEL4_x32 with debugging symbols, now get the following when run:
| |
− | </pre>
| |
− | | |
− | <pre>
| |
− | [dan@benfranklin GEMC-RHEL4_x32]$ gemc
| |
− | | |
− | | |
− | >>> gemc Init: >> Geant4 MonteCarlo
| |
− | >>> gemc Init: >> Setting CLHEP Random Engine...
| |
− | >>> gemc Init: >> Instantiating Run Manager...
| |
− | | |
− | *************************************************************
| |
− | Geant4 version Name: geant4-09-01 (14-December-2007)
| |
− | Copyright : Geant4 Collaboration
| |
− | Reference : NIM A 506 (2003), 250-303
| |
− | WWW : http://cern.ch/geant4
| |
− | *************************************************************
| |
− | | |
− | >>> gemc Init: >> Building gemc Detector...
| |
− | >>> gemc MySQL: >> Connecting to database: clasgeometry as clasuser.
| |
− | | |
− | | |
− | | |
− | >>> gemc Init: >> Initializing Physics List...
| |
− | >>> gemc Init: >> Initializing Primary Generator Action...
| |
− | | |
− | >>> gemc Beam Settings >> Beam Type: e-
| |
− | >>> gemc Beam Settings >> Beam Energy: 11 GeV
| |
− | >>> gemc Beam Settings >> Beam Direction: (0, 0, 1)
| |
− | >>> gemc Beam Settings >> Beam Vertex: (0, 0, 0) cm
| |
− | | |
− | >>> gemc Init: >> Initializing Event Action...
| |
− | >>> gemc Init: >> Initializing User Interface...
| |
− | >>> gemc Init: >> Initializing Run Manager...
| |
− | | |
− | >>> gemc Construction: >> Building Detector from Geometry STL Map...
| |
− | | |
− | >>> gemc Magnetic Field: >> Magnetic Field <ihep-solenoid> doesn't exist yet. Adding <ihep-solenoid>.
| |
− | >>> gemc Magnetic Field Constructor: >> File sol12_map.dat could not be opened. Exiting.
| |
− | [dan@benfranklin GEMC-RHEL4_x32]$
| |
− | | |
− | </pre>
| |
− | | |
− | Kyle and I updated the Detailed Instructions wiki page, though I suspended most of the changes as I don't
| |
− | have time ATM to make them comprehensive.
| |
− | | |
− | '''Tuesday'''
| |
− | 12:30-14:00
| |
− | 15:40-16:15
| |
− | <pre>
| |
− | Re-instated the Detailed Instructions changes, and expanded.
| |
− | GEMC does not work very well. Fixed previous error message by downloading sol12_map.dat and fsolenoid.dat
| |
− | Now running "gemc -GT=svtgeometry" results in rapid scrolling of:
| |
− | >>> gemc Magnetic Field Constructor: >> 466 transverse index wrong. Map point should be 233 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 467 transverse index wrong. Map point should be 233.5 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 468 transverse index wrong. Map point should be 234 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 469 transverse index wrong. Map point should be 234.5 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 470 transverse index wrong. Map point should be 235 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 471 transverse index wrong. Map point should be 235.5 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 472 transverse index wrong. Map point should be 236 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 473 transverse index wrong. Map point should be 236.5 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 474 transverse index wrong. Map point should be 237 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 475 transverse index wrong. Map point should be 237.5 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 476 transverse index wrong. Map point should be 238 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 477 transverse index wrong. Map point should be 238.5 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 478 transverse index wrong. Map point should be 239 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 479 transverse index wrong. Map point should be 239.5 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 480 transverse index wrong. Map point should be 240 but it's 8.07098e-275 instead.
| |
− | >>> gemc Magnetic Field Constructor: >> 481 transverse index wrong.
| |
− | etc...
| |
− | </pre>
| |
− | | |
− | '''Thursday, 28'''
| |
− | | |
− | <pre>
| |
− | 12:00-14:00
| |
− | </pre>
| |
− | | |
− | ====March 2008====
| |
− | '''Sunday 23'''
| |
− | <pre>
| |
− | 14:30-17:00
| |
− | Installed ROOT on Pumpkin, started playing with it.
| |
− | Played with GEMC.
| |
− | Helloworld windows not opening with Pumpkin ROOT. Needs X11 libs maybe? Installing on Parity, not waiting for compile.
| |
− | | |
− | </pre>
| |
− | | |
− | '''Tuesday 25'''
| |
− | <pre>
| |
− | 14:00-17:00
| |
− | | |
− | </pre>
| |
− | | |
− | ====April 2008====
| |
− | | |
− | '''Tuesday 1'''
| |
− | <pre>
| |
− | 13:00-17:00
| |
− | Collaborated with Sam and Kyle on GEMC, ROOT, etc.
| |
− | </pre>
| |
− | | |
− | '''Monday 7'''
| |
− | <pre>
| |
− | 15:30-18:00
| |
− | Trying to get ROOT to make sense of a serious GEMC run.
| |
− | Run an experiment:
| |
− | gemc -GT=svtgeometry -BEAM_P="proton, 1.0*GeV, 80*deg, 0*deg" -SPREAD_P="0.5*GeV, 40*deg, 360*deg" -SPREAD_V="(0.1, 0.1, 2.5)cm" -OUTPUT="evio, Test3.ev" -LUMI_P="e-, 11*GeV, 0, 0" -LUMI_V="(0, 0, -5)cm" -LUMI_EVENT="100, 124*ns, 2*ns" -USE_PHYSICSL=QGSP -HALL_MATERIAL=Vacuum -N=2500
| |
− | | |
− | Convert the output from evio to root:
| |
− | | |
− | gemc_evio2root Test3.ev Test3.root
| |
− | | |
− | Run ROOT (without splash):
| |
− | root -l
| |
− | | |
− | Load the data:
| |
− | TFile *g = new TFile("$GEMC/Test3.root")
| |
− | | |
− | Look around:
| |
− | g->ls();
| |
− | | |
− | Yields:
| |
− | | |
− | root [2] g->ls();
| |
− | TFile** /net/home/dan/GEMC-RHEL5_x64/Test3.root
| |
− | TFile* /net/home/dan/GEMC-RHEL5_x64/Test3.root
| |
− | KEY: TTree genT;1 gemc generated infos tree
| |
− | KEY: TTree svtT;1 gemc SVT hits infos tree
| |
− | KEY: TTree fvtT;1 gemc FVT hits infos tree
| |
− | KEY: TTree itofT;1 gemc Inner TOF hits infos tree
| |
− | KEY: TTree dcT;1 gemc DC hits infos tree
| |
− | | |
− | Hurray!
| |
− | | |
− | See what's inside:
| |
− | | |
− | svtT->Print()
| |
− | root [2] svtT->Print()
| |
− | ******************************************************************************
| |
− | *Tree :svtT : gemc SVT hits infos tree *
| |
− | *Entries : 2500 : Total = 2023753 bytes File Size = 885621 *
| |
− | * : : Tree compression factor = 2.26 *
| |
− | ******************************************************************************
| |
− | *Br 0 :evn : evn/I *
| |
− | *Entries : 2500 : Total Size= 10614 bytes One basket in memory *
| |
− | *Baskets : 0 : Basket Size= 32000 bytes Compression= 1.00 *
| |
− | *............................................................................*
| |
− | *Br 1 :nsvthit : nsvthit/I *
| |
− | *Entries : 2500 : Total Size= 10638 bytes One basket in memory *
| |
− | *Baskets : 0 : Basket Size= 32000 bytes Compression= 1.00 *
| |
− | *............................................................................*
| |
− | *Br 2 :layer : layer[nsvthit]/I *
| |
− | *Entries : 2500 : Total Size= 100206 bytes File Size = 10129 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 8.61 *
| |
− | *............................................................................*
| |
− | *Br 3 :sector : sector[nsvthit]/I *
| |
− | *Entries : 2500 : Total Size= 100215 bytes File Size = 16966 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 5.14 *
| |
− | *............................................................................*
| |
− | *Br 4 :strip : strip[nsvthit]/I *
| |
− | *Entries : 2500 : Total Size= 100206 bytes File Size = 35645 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 2.45 *
| |
− | *............................................................................*
| |
− | *Br 5 :Edep : Edep[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100204 bytes File Size = 73455 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 1.19 *
| |
− | *............................................................................*
| |
− | *Br 6 :E : E[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100177 bytes File Size = 70940 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 1.23 *
| |
− | *............................................................................*
| |
− | *Br 7 :x : x[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100177 bytes File Size = 73498 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 1.19 *
| |
− | *............................................................................*
| |
− | *Br 8 :y : y[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100177 bytes File Size = 72909 *
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− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 1.20 *
| |
− | *............................................................................*
| |
− | *Br 9 :z : z[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100177 bytes File Size = 77944 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 1.12 *
| |
− | *............................................................................*
| |
− | *Br 10 :lx : lx[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100186 bytes File Size = 77295 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 1.13 *
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− | *............................................................................*
| |
− | *Br 11 :ly : ly[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100186 bytes File Size = 17058 *
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− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 5.11 *
| |
− | *............................................................................*
| |
− | *Br 12 :lz : lz[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100186 bytes File Size = 77767 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 1.12 *
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− | *............................................................................*
| |
− | *Br 13 :t : t[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100177 bytes File Size = 62687 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 1.39 *
| |
− | *............................................................................*
| |
− | *Br 14 :pid : pid[nsvthit]/I *
| |
− | *Entries : 2500 : Total Size= 100188 bytes File Size = 8643 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 10.09 *
| |
− | *............................................................................*
| |
− | *Br 15 :mpid : mpid[nsvthit]/I *
| |
− | *Entries : 2500 : Total Size= 100197 bytes File Size = 8162 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 10.68 *
| |
− | *............................................................................*
| |
− | *Br 16 :vx : vx[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100186 bytes File Size = 19922 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 4.38 *
| |
− | *............................................................................*
| |
− | *Br 17 :vy : vy[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100186 bytes File Size = 19928 *
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− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 4.37 *
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− | *............................................................................*
| |
− | *Br 18 :vz : vz[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100186 bytes File Size = 19797 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 4.40 *
| |
− | *............................................................................*
| |
− | *Br 19 :mvx : mvx[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100195 bytes File Size = 9878 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 8.83 *
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− | *............................................................................*
| |
− | *Br 20 :mvy : mvy[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100195 bytes File Size = 9899 *
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− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 8.81 *
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− | *............................................................................*
| |
− | *Br 21 :mvz : mvz[nsvthit]/F *
| |
− | *Entries : 2500 : Total Size= 100195 bytes File Size = 9872 *
| |
− | *Baskets : 3 : Basket Size= 32000 bytes Compression= 8.83 *
| |
− | *............................................................................*
| |
− | </pre>
| |
− | | |
− | '''Tuesday 8'''
| |
− | 11:00-12:00
| |
− | <pre>
| |
− | I have been learning to use ROOT with a nice introduction at http://slac.stanford.edu/BFROOT/www/doc/workbook/root1/root1.html
| |
− | Interesting bits:
| |
− | Save a canvas like so:
| |
− | c1->SaveAs("birches.png");
| |
− | | |
− | Making hitograms:
| |
− | TH1F *myfirsthist = new TH1F("myfirsthist", "How many birches?",10,1,100);
| |
− | </pre>
| |
− | | |
− | '''Tuesday 15'''
| |
− | 11:15-12:00
| |
− | 13:30-16:15
| |
− | <pre>
| |
− | Okay, so what we might want to do, beginning to end, is this:
| |
− | Run an experiment, outputting to EVIO format
| |
− | Run evio2root
| |
− | (Write a ROOT script which extracts the data we want)
| |
− | Run the root script, which generates histograms, or graphs, or images, or descriptive text data.
| |
− | | |
− | Soeaking of, save a histogram like so:
| |
− | c1->SaveAs("birches.C");
| |
− | | |
− | {
| |
− | TFile *f = new TFile("$GEMC/Test3.root")
| |
− | | |
− | svtT->Draw("Edep");
| |
− | #c1->SaveAs("svtT_Edep.C");
| |
− | }
| |
− | | |
− | Sam had an idea on how to pursue one of our objectives:
| |
− | We could set-up just an SVT and send particles straight at it, then vary the angle and compare the sensitivity.
| |
− | </pre>
| |
− | | |
− | '''Tuesday, 29'''
| |
− | 13:00-16:00
| |
− | <pre>
| |
− | I've been trying to figure-out if we can manually specify some geometry for the angular dependence problem.
| |
− | It doesn't look like we can, but perhaps we can use the new GCARD feature to do what we want.
| |
− | Compiling the last few GEMC versions has not worked for me, due to a complaint about QDomDocument not existing.
| |
− | Fixed by adding "QtXml" to the loadqt pyscript. Could not download newest pyscripts due to forgetting JLAB
| |
− | password (again). *sigh* Will check tonight if they have fixed it, and will email Maurizio if not.
| |
− | For some reason my GMail account never gets the gemc_software newsletters, though I have tried to sign-up
| |
− | twice.
| |
− | </pre>
| |
− | | |
− | ====May 2008====
| |
− | | |
− | '''Tuesday 6'''
| |
− | 12:00-
| |
− | <pre>
| |
− | Rotation and position changes don't seem to work in GCARD yet, so we'll rotate the gun. Which is probably
| |
− | better anyway.
| |
− | | |
− | | |
− | So we need to set-up a script which runs gemc with just the BST, and rotates gun through 1-90 degrees.
| |
− | Use GCARD to translate origin close to SVT to interior. Output to evio. Run evio2root.
| |
− | Oops, GCARD can't do this yet.
| |
− | | |
− | First attempt at script:
| |
− | | |
− | for theta in `seq 1 90`; do gemc -gcard=closeBST.gcard -OUTPUT="evio, $theta.ev" -N=1 -HALL_MATERIAL=Vacuum \
| |
− | -BEAM_P="proton, 0.8GeV, "$theta"*deg, "0"*deg" -USE_QT=0 ; done
| |
− | | |
− | What are reasonable values for -BEAM_P -SPREAD_P -SPREAD_V -LUMI_P -LUMI_V -LUMI_EVENT= -USE_PHYSICSL
| |
− | | |
− | | |
− | What does -NGENP do?
| |
− | | |
− | Really want to rotate through phi as well.
| |
− | Attempt 2:
| |
− | | |
− | for phi in `seq -25 25`; do for theta in `seq -90 90`; do $GEMC/gemc -GT=BST \
| |
− | -OUTPUT="evio, "theta$theta"phi"$phi".ev" -N=100 -HALL_MATERIAL=Vacuum \
| |
− | -BEAM_P="proton, 0.8GeV, "$theta"*deg, "phi"*deg" -USE_QT=0 ; done; done
| |
− | | |
− | Should we run it? We would be hammering the database. Kyle's asking Maurizio.
| |
− | | |
− | So how will we parse this? The end result I think we want is a graph of angle vs.hits.
| |
− | | |
− | </pre>
| |
| | | |
| ====June 2008==== | | ====June 2008==== |